STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_5976Snf2 family helicase. (935 aa)    
Predicted Functional Partners:
CMQ_6203
Snf2 family helicase.
 
     0.950
CMQ_1330
Asparagine amidase a.
 
      0.816
CMQ_740
DNA repair protein.
    
 0.816
CMQ_4128
Ubiquitin-conjugating enzyme; Belongs to the complex I LYR family.
    
 0.806
CMQ_2728
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.759
CMQ_5866
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.733
CMQ_5825
Proliferating cell nuclear antigen.
   
 0.733
CMQ_1119
3-5 exonuclease helicase.
  
 
 0.709
CMQ_4235
60S ribosomal protein l40.
    
  0.707
CMQ_4115
RNA polymerase 1 specific transcription initiation factor.
    
  0.707
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.