STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1989DNA replication factor c subunit. (395 aa)    
Predicted Functional Partners:
CMQ_6917
DNA replication factor c subunit.
  
0.999
CMQ_3568
Aaa ATPase domain containing protein.
  
0.999
CMQ_1424
Cell cycle checkpoint protein.
   
 0.999
CMQ_4910
DNA replication factor c subunit.
   
0.999
CMQ_4803
Replication factor C subunit 1; Belongs to the activator 1 large subunit family.
   
0.999
CMQ_5352
Sister chromatid cohesion protein.
   
 0.994
CMQ_5866
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.992
CMQ_5825
Proliferating cell nuclear antigen.
  
 0.992
CMQ_1119
3-5 exonuclease helicase.
   
 0.990
CMQ_135
Hmg-i/hmg-y, DNA-binding protein.
   
 0.986
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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