STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2017Phenylalanyl-tRNA synthetase beta chain cytoplasmic. (510 aa)    
Predicted Functional Partners:
CMQ_5784
Phenylalanyl-tRNA beta subunit.
  
 0.997
CMQ_2002
Carbamoyl-phosphate large subunit.
 
 
  
 0.868
CMQ_4604
Phenylalanyl-tRNA synthetase alpha subunit.
   
 
 0.825
CMQ_1886
Uncharacterized protein.
 
      0.782
CMQ_7249
ATP dependent RNA helicase.
   
   0.637
CMQ_2420
Argininosuccinate synthase.
    
  0.616
CMQ_3417
Seryl-tRNA synthetase.
   
 
 0.609
CMQ_3801
Centrin-binding protein.
   
 
 0.609
CMQ_6231
Seryl-tRNA synthetase.
   
 
 0.609
CMQ_3719
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.604
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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