STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2000Frg1-like family protein. (269 aa)    
Predicted Functional Partners:
CMQ_7302
Cell cycle control protein.
   
   0.968
CMQ_307
Pre-mRNA splicing factor.
    
   0.830
CMQ_1975
Ubiquitin-protein ligase sel1.
 
      0.774
CMQ_3819
Cell cycle control protein.
    
   0.734
CMQ_4025
mRNA splicing factor.
    
   0.727
CMQ_5084
Small nuclear ribonucleoprotein.
    
 
 0.695
CMQ_1439
Small nuclear ribonucleoprotein.
    
 
 0.690
CMQ_1023
Syf2 splicing factor family protein.
   
   0.681
CMQ_1848
WD repeat protein.
 
      0.665
CMQ_5661
Bcas2 family protein.
   
 
 0.647
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.