STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7604Conserved leucine-rich repeat protein. (1210 aa)    
Predicted Functional Partners:
CMQ_1411
CID domain-containing protein.
    
 0.991
CMQ_8111
Small nuclear ribonucleoprotein Sm D3.
    
 0.812
CMQ_2079
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.809
CMQ_3209
Small nuclear ribonucleoprotein Sm D2.
    
 0.806
CMQ_1439
Small nuclear ribonucleoprotein.
    
 0.797
CMQ_1355
Small nuclear ribonucleoprotein G.
    
  0.796
CMQ_6185
Ankyrin repeat-containing protein.
    
 0.796
CMQ_681
U1 small nuclear ribonucleoprotein.
    
 0.792
CMQ_5987
RNA-binding domain containing protein.
    
 0.792
CMQ_6450
Elongation factor 1-gamma.
    
  0.721
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.