STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7135Peptidyl-prolyl cis-trans isomerase. (182 aa)    
Predicted Functional Partners:
CMQ_5408
PIPK domain-containing protein.
    
 0.980
CMQ_7822
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.937
CMQ_7128
50S ribosomal protein l14; Belongs to the universal ribosomal protein uL14 family.
 
      0.875
CMQ_1029
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.802
CMQ_3424
Sh3 domain containing protein.
   
 0.795
CMQ_1602
Uncharacterized protein.
   
 0.774
CMQ_220
Uncharacterized protein.
   
 0.774
CMQ_5672
Dual specificity protein kinase pom1.
    
 0.684
CMQ_4741
Protein kinase.
    
 0.684
CMQ_5532
Transcription RNA-processing factor ssu72.
   
 
 0.674
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.