STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7169Taurine catabolism dioxygenase family protein. (369 aa)    
Predicted Functional Partners:
CMQ_3490
Nitrate reductase.
   
 
 0.793
CMQ_3716
TauD domain-containing protein.
  
  
0.734
CMQ_8218
Gamma-butyrobetaine hydroxylase.
     
 0.684
CMQ_3830
Rhodanese domain containing protein.
     
 0.676
CMQ_1167
Asparagine synthetase.
  
 
 0.652
CMQ_6384
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
    
 0.624
CMQ_986
3-hydroxybutyryl-dehydrogenase.
     
 0.593
CMQ_1293
Integral membrane protein.
     
 0.593
CMQ_1165
Cyclic nucleotide-binding domain containing protein.
   
 
  0.589
CMQ_1843
Mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.570
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.