STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7227Clr5 domain-containing protein. (217 aa)    
Predicted Functional Partners:
CMQ_7931
Glycerophosphodiester phosphodiesterase gde1.
    
 0.714
CMQ_4650
Cyclin dependent kinase inhibitor.
    
 0.681
CMQ_4590
Rho GTPase activator.
    
 0.645
CMQ_328
Uncharacterized protein.
    
  0.627
CMQ_6861
Serine/threonine-protein phosphatase.
    
  0.621
CMQ_1119
3-5 exonuclease helicase.
    
 0.604
CMQ_2436
Ubiquitin-conjugating enzyme.
    
 0.593
CMQ_7915
Scf ubiquitin ligase subunit; Belongs to the cullin family.
    
 0.582
CMQ_47
Nedd8-like protein.
    
  0.565
CMQ_5954
An1-type zinc finger protein.
    
 0.560
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.