Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CMQ_1283 | CMQ_2436 | F0XD65 | F0XJS9 | Protein phosphatase. | Ubiquitin-conjugating enzyme. | 0.713 |
CMQ_1283 | CMQ_2797 | F0XD65 | F0XHK3 | Protein phosphatase. | Protein phosphatase. | 0.514 |
CMQ_1283 | CMQ_6941 | F0XD65 | F0X6P8 | Protein phosphatase. | Traf-like signal protein. | 0.754 |
CMQ_1283 | CMQ_7287 | F0XD65 | F0XPF5 | Protein phosphatase. | Alternative oxidase. | 0.738 |
CMQ_24 | CMQ_7287 | F0XR85 | F0XPF5 | Stress response transcription factor. | Alternative oxidase. | 0.747 |
CMQ_24 | CMQ_7793 | F0XR85 | F0XS89 | Stress response transcription factor. | RNA recognition motif-containing protein. | 0.697 |
CMQ_24 | CMQ_7943 | F0XR85 | F0XS51 | Stress response transcription factor. | Px domain containing protein. | 0.510 |
CMQ_2436 | CMQ_1283 | F0XJS9 | F0XD65 | Ubiquitin-conjugating enzyme. | Protein phosphatase. | 0.713 |
CMQ_2436 | CMQ_2797 | F0XJS9 | F0XHK3 | Ubiquitin-conjugating enzyme. | Protein phosphatase. | 0.713 |
CMQ_2436 | CMQ_6941 | F0XJS9 | F0X6P8 | Ubiquitin-conjugating enzyme. | Traf-like signal protein. | 0.998 |
CMQ_2436 | CMQ_6988 | F0XJS9 | F0X7I5 | Ubiquitin-conjugating enzyme. | Tol-like protein. | 0.987 |
CMQ_2436 | CMQ_7287 | F0XJS9 | F0XPF5 | Ubiquitin-conjugating enzyme. | Alternative oxidase. | 0.819 |
CMQ_2436 | CMQ_883 | F0XJS9 | F0XFX0 | Ubiquitin-conjugating enzyme. | Protein phosphatase. | 0.713 |
CMQ_2436 | MED4 | F0XJS9 | F0X890 | Ubiquitin-conjugating enzyme. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.713 |
CMQ_2797 | CMQ_1283 | F0XHK3 | F0XD65 | Protein phosphatase. | Protein phosphatase. | 0.514 |
CMQ_2797 | CMQ_2436 | F0XHK3 | F0XJS9 | Protein phosphatase. | Ubiquitin-conjugating enzyme. | 0.713 |
CMQ_2797 | CMQ_6941 | F0XHK3 | F0X6P8 | Protein phosphatase. | Traf-like signal protein. | 0.746 |
CMQ_2797 | CMQ_7287 | F0XHK3 | F0XPF5 | Protein phosphatase. | Alternative oxidase. | 0.738 |
CMQ_2797 | CMQ_883 | F0XHK3 | F0XFX0 | Protein phosphatase. | Protein phosphatase. | 0.684 |
CMQ_6941 | CMQ_1283 | F0X6P8 | F0XD65 | Traf-like signal protein. | Protein phosphatase. | 0.754 |
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