STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7065Uncharacterized protein. (427 aa)    
Predicted Functional Partners:
CMQ_2399
Uncharacterized protein.
    
 0.626
CMQ_4150
Uncharacterized protein.
   
 0.615
CMQ_3945
Uncharacterized protein.
   
 0.615
CMQ_5834
Deoxyuridine 5-triphosphate nucleotidohydrolase.
   
 0.615
CMQ_728
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.576
CMQ_2606
Mating-type switching protein swi10.
    
 0.569
CMQ_1862
Endoplasmic reticulum and nuclear membrane proteinc.
    
  0.544
CMQ_2506
Dead box helicase.
    
 0.532
CMQ_4997
DNA repair protein.
    
 0.524
CMQ_4781
Putative replication factor-a protein.
    
  0.506
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.