STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7290Sumo ligase. (508 aa)    
Predicted Functional Partners:
CMQ_3763
Ubiquitin-like modifier.
    
 0.979
CMQ_586
Sumo conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.977
CMQ_7344
Bet3 family protein.
 
      0.895
CMQ_2728
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.841
CMQ_2436
Ubiquitin-conjugating enzyme.
    
 0.804
CMQ_6004
Chromosomal organization and DNA repair protein.
    
 
 0.792
CMQ_4099
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
    
 0.759
CMQ_5866
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.757
CMQ_5825
Proliferating cell nuclear antigen.
   
 
 0.757
CMQ_740
DNA repair protein.
    
 
 0.752
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.