STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7519Serine palmitoyltransferase. (657 aa)    
Predicted Functional Partners:
CMQ_851
Serine palmitoyl transferase subunit.
  
0.998
CMQ_767
Protein orm1.
    
 
 0.948
CMQ_4455
Phenolpthiocerol synthesis polyketide synthase ppsa; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.912
CMQ_2942
GPI-anchor biosynthesis protein.
     
 0.890
CMQ_4883
3-ketosphinganine reductase.
     
 0.890
CMQ_6848
Tryptophan synthase.
    
 0.859
CMQ_5163
Tryptophan synthase.
    
 0.859
CMQ_7321
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.858
CMQ_3603
Polyketide synthase.
    
 0.835
CMQ_884
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.827
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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