STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7668Erf4 domain-containing protein. (663 aa)    
Predicted Functional Partners:
CMQ_1390
Peroxisomal membrane protein receptor.
    
 0.742
CMQ_1536
Peroxisomal biogenesis factor.
   
 0.625
CMQ_4278
Peroxisomal membrane protein.
   
 
 0.602
CMQ_1160
Peroxisome biosynthesis protein, pas10.
     
 0.601
CMQ_1815
Peroxisomal membrane protein PEX16.
   
 
 0.590
CMQ_2987
Peroxisomal membrane protein.
     
 0.578
CMQ_3139
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
     
 0.577
CMQ_5933
Transthyretin-like protein.
    
 0.573
CMQ_6489
Peroxisomal membrane anchor protein.
     
 0.564
CMQ_7854
Peroxisomal membrane protein.
     
 0.564
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.