STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7179Snare complex subunit. (348 aa)    
Predicted Functional Partners:
CMQ_4614
Snare complex subunit.
    
 0.880
CMQ_1038
Snare protein; Belongs to the synaptobrevin family.
     
 0.807
CMQ_6795
Vesicle transport v-SNARE protein.
     
 0.781
CMQ_6633
Snare domain containing protein; Belongs to the syntaxin family.
     
 0.743
CMQ_4047
Arf GTPase activator.
  
  
  0.645
CMQ_2524
Uncharacterized protein.
     
 0.557
CMQ_5245
Sorting nexin-3.
     
 0.536
CMQ_104
Cellular morphogenesis protein.
    
  0.511
CMQ_5533
E3 ubiquitin-protein ligase.
    
  0.511
CMQ_4606
Uncharacterized protein.
    
  0.511
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.