STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7053Calpain-like protease; Belongs to the peptidase C2 family. (940 aa)    
Predicted Functional Partners:
CMQ_7971
Calcium-binding modulator protein.
   
 0.904
CMQ_7385
Zinc finger protein pac1.
   
 0.802
CMQ_6043
Snf7 family protein.
    
 
 0.672
CMQ_5010
pH signal transduction protein.
    
 
 0.610
CMQ_2885
Dpy-30 protein.
    
 
 0.609
CMQ_6629
pH signal transduction protein.
    
 
 0.602
CMQ_3546
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.583
CMQ_583
Protein phosphatase.
 
  
   0.583
CMQ_6256
Class 5 myosin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
   0.583
CMQ_8128
pH response protein.
    
 
 0.575
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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