STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_209Geranylgeranyl transferase type 1 beta subunit. (468 aa)    
Predicted Functional Partners:
CMQ_1012
Farnesyltransferase alpha subunit ram2.
    
 0.997
CMQ_4341
Rho GTPase rho1.
    
 
 0.523
CMQ_3156
Rho-like GTPase cdc42.
    
 
 0.502
CMQ_1019
Hlh transcription factor.
    
 
 0.501
CMQ_6385
Hlh transcription factor.
    
 
 0.501
CMQ_6652
Ras family GTP-binding protein rho1p.
    
 
 0.458
CMQ_4396
Rho GTPase.
    
 
 0.458
CMQ_7642
Mitochondrial outer membrane protein.
      
 0.410
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.