STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7984ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family. (251 aa)    
Predicted Functional Partners:
CMQ_6485
Tetratricopeptide repeat domain containing protein.
   
 
 0.994
CMQ_5769
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.994
CMQ_2121
Duf1620 domain containing protein.
    
 
 0.991
CMQ_5912
Duf786 domain containing protein.
   
 
 0.984
CMQ_4631
DUF2012 domain-containing protein.
   
 
 0.965
CMQ_8035
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.945
CMQ_6160
Uncharacterized protein.
    
 
 0.939
CMQ_2495
Dynactin arp1 p62 subunit.
    
 
 0.937
CMQ_6104
Integral er membrane protein.
    
 0.620
CMQ_7533
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 
 0.619
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.