STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7995Transcription initiation factor tfiid subunit tsm1. (1826 aa)    
Predicted Functional Partners:
CMQ_3620
Transcription factor tfiid complex.
   
 0.999
CMQ_3441
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.999
CMQ_1312
Acyl_transf_3 domain-containing protein.
    
 0.999
CMQ_1078
Transcription initiation factor tfiid subunit.
    
 0.999
CMQ_622
Transcription initiation factor tfiid subunit.
    
 0.999
CMQ_578
Transcription initiation factor 31kd.
    
 0.999
CMQ_2443
Transcription initiation factor tfiid complex subunit.
    
 0.999
CMQ_6284
Transcription initiation factor tfiid.
    
 0.999
CMQ_1951
Transcription initiation factor tfiid subunit.
    
 0.999
CMQ_2674
Bromodomain associated protein.
    
 0.994
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.