STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7835Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (428 aa)    
Predicted Functional Partners:
CMQ_7399
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
 
 0.999
CMQ_4993
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
 0.997
CMQ_884
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
 
 0.992
CMQ_2001
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
 
 0.992
CMQ_7955
Methylenetetrahydrofolate dehydrogenase.
  
 
 0.972
CMQ_1326
C1 tetrahydrofolate ligase.
  
 0.908
CMQ_4906
Aminotransferase class 5.
   
 
 0.897
CMQ_5903
Phosphoribosylaminoimidazolecarboxamide formyltransferase imp cyclohydrolase.
   
 
 0.889
CMQ_4675
Glutamate synthase.
    
 0.863
CMQ_7161
Bifunctional purine biosynthesis protein.
   
 
 0.860
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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