STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_5693Short chain dehydrogenase reductase. (340 aa)    
Predicted Functional Partners:
CMQ_3001
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.739
CMQ_4955
Dihydrofolate reductase.
   
 
 0.670
CMQ_7530
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
   
 
 0.670
CMQ_3603
Polyketide synthase.
  
 0.639
CMQ_7050
Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.576
CMQ_7462
2Fe-2S iron-sulfur cluster-binding domain containing protein.
   
 0.560
CMQ_6443
Short chain dehydrogenase reductase.
 
  
 
0.559
CMQ_1395
Metallo-beta-lactamase superfamily protein.
   
 0.558
CMQ_5938
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
  0.548
CMQ_6989
Short chain dehydrogenase reductase.
  
  
 
0.525
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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