STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4512Cue domain containing protein. (478 aa)    
Predicted Functional Partners:
CMQ_4650
Cyclin dependent kinase inhibitor.
 
  
 0.942
CMQ_1872
Proteasome regulatory particle subunit.
    
  0.901
CMQ_6297
Duf500 and sh3 domain containing protein.
    
   0.719
CMQ_4590
Rho GTPase activator.
    
 0.619
CMQ_5463
Histone promoter control protein.
  
 
  0.596
CMQ_2436
Ubiquitin-conjugating enzyme.
    
 0.592
CMQ_6825
Autophagy-related protein.
    
 
 0.588
CMQ_6520
Duf500 domain containing protein.
    
   0.578
CMQ_2518
Duf500 domain containing protein.
    
   0.578
CMQ_2294
Duf500 domain containing protein.
    
   0.578
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.