STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4905Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL16 family. (293 aa)    
Predicted Functional Partners:
CMQ_1218
Elongation factor 3.
   
 
 0.991
CMQ_5015
mRNA-nucleus export ATPase.
   
 
 0.990
CMQ_4265
50S ribosomal protein l3.
  
 0.988
CMQ_2078
50S ribosomal protein l13.
  
 0.987
CMQ_3755
60S ribosomal protein; Belongs to the universal ribosomal protein uL6 family.
  
 0.985
CMQ_3064
Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family.
  
 0.985
CMQ_7128
50S ribosomal protein l14; Belongs to the universal ribosomal protein uL14 family.
  
 0.984
CMQ_6106
50S ribosomal protein l2.
  
 0.980
CMQ_94
50S ribosomal subunit.
  
 0.979
CMQ_5067
37S ribosomal protein s16.
   
 
 0.978
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.