STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4275Integral membrane protein. (1177 aa)    
Predicted Functional Partners:
CMQ_6988
Tol-like protein.
    
 0.820
CMQ_2436
Ubiquitin-conjugating enzyme.
   
 0.770
CMQ_6185
Ankyrin repeat-containing protein.
    
 0.761
CMQ_6941
Traf-like signal protein.
   
 0.730
CMQ_24
Stress response transcription factor.
    
 0.727
CMQ_7931
Glycerophosphodiester phosphodiesterase gde1.
    
 0.725
CMQ_4590
Rho GTPase activator.
    
 0.723
CMQ_7943
Px domain containing protein.
    
 0.713
CMQ_3292
Uncharacterized protein.
  
 0.712
CMQ_7793
RNA recognition motif-containing protein.
    
 0.712
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.