STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH07833.1PFAM: Cupin 2, conserved barrel; KEGG: fre:Franean1_7217 hypothetical protein. (171 aa)    
Predicted Functional Partners:
ssuB
Taurine-transporting ATPase; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
       0.773
AEH07835.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_6336 putative ABC transporter permease protein.
       0.773
AEH07832.1
KEGG: cai:Caci_2771 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup.
 
     0.610
AEH09455.1
KEGG: bbe:BBR47_29730 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; PFAM: Amidohydrolase 2.
 
  
  0.469
AEH07831.1
Hypothetical protein.
       0.428
AEH09181.1
KEGG: fal:FRAAL3869 hypothetical protein.
  
     0.419
Your Current Organism:
Frankia symbiont
NCBI taxonomy Id: 656024
Other names: F. symbiont of Datisca glomerata, Frankia symbiont of Datisca glomerata
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