STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH09426.1GAF modulated transcriptional regulator, LuxR family; KEGG: mva:Mvan_3973 putative GAF sensor protein; PFAM: Transcription regulator LuxR, C-terminal; GAF; SMART: Transcription regulator LuxR, C-terminal; GAF. (377 aa)    
Predicted Functional Partners:
AEH08069.1
GAF sensor hybrid histidine kinase; KEGG: fal:FRAAL6455 putative two-component system sensory histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; HAMP linker domain; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; HAMP linker domain; Signal transduction response regulator, receiver region.
  
 0.997
AEH11097.1
PAS/PAC sensor hybrid histidine kinase; KEGG: fra:Francci3_3685 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region.
  
 0.993
AEH08240.1
KEGG: fra:Francci3_4049 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; HAMP linker domain; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; HAMP linker domain.
  
 0.992
AEH08285.1
Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; KEGG: fre:Franean1_7031 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAS.
  
 0.990
AEH08826.1
KEGG: fal:FRAAL4748 putative two-component sensor; PFAM: GAF; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: GAF.
 
 0.921
AEH11389.1
KEGG: fra:Francci3_1560 putative signal transduction histidine kinase; PFAM: GAF; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: GAF.
 
 0.920
AEH10858.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: tbi:Tbis_2829 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS.
  
 0.885
AEH10988.1
KEGG: fre:Franean1_1110 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
   
 0.868
AEH10669.1
Putative signal transduction histidine kinase; KEGG: fal:FRAAL0824 putative two-component system sensor kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like.
 
 0.849
AEH10882.1
KEGG: fre:Franean1_1229 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted.
  
 
 0.813
Your Current Organism:
Frankia symbiont
NCBI taxonomy Id: 656024
Other names: F. symbiont of Datisca glomerata, Frankia symbiont of Datisca glomerata
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