STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D5G5X9_TUBMMUncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (334 aa)    
Predicted Functional Partners:
D5GQ60_TUBMM
Uncharacterized protein.
   
 
 0.678
D5GI48_TUBMM
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.665
D5GFQ2_TUBMM
Tudor domain-containing protein.
      
 0.571
D5GA84_TUBMM
Ribosomal_L28e domain-containing protein.
   
   0.511
D5G833_TUBMM
Uncharacterized protein.
   
   0.503
D5GME7_TUBMM
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.490
D5G5F2_TUBMM
Uncharacterized protein.
   
 
 0.485
D5GAC1_TUBMM
Ribosomal_L2_C domain-containing protein.
   
 
 0.472
D5GDH1_TUBMM
Uncharacterized protein.
   
 
 0.465
D5GL18_TUBMM
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.461
Your Current Organism:
Tuber melanosporum
NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28
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