STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D5GA04_TUBMMUncharacterized protein. (259 aa)    
Predicted Functional Partners:
D5GAK3_TUBMM
Uncharacterized protein; Belongs to the FGGY kinase family.
  
 0.910
D5GCE1_TUBMM
PlsC domain-containing protein.
     
 0.901
D5GIK3_TUBMM
Aldo_ket_red domain-containing protein.
     
 0.901
D5G677_TUBMM
PKS_ER domain-containing protein.
    
  0.900
D5GKR8_TUBMM
Hydrolase_4 domain-containing protein.
     
 0.900
D5GMX0_TUBMM
Uncharacterized protein.
  
 
 0.846
D5GP93_TUBMM
Aminotran_5 domain-containing protein.
    
 0.817
D5GJI9_TUBMM
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.765
D5GCE3_TUBMM
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.735
D5GKQ7_TUBMM
Uncharacterized protein.
    
 0.702
Your Current Organism:
Tuber melanosporum
NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28
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