STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D5GJJ9_TUBMMUncharacterized protein. (422 aa)    
Predicted Functional Partners:
D5GEE6_TUBMM
Uncharacterized protein.
   
 0.983
D5GKC0_TUBMM
RPOLD domain-containing protein.
 
 0.980
D5G9K1_TUBMM
Uncharacterized protein.
  
 0.973
D5GKX5_TUBMM
Uncharacterized protein.
   
 0.973
D5GNK6_TUBMM
Uncharacterized protein.
  
 0.972
D5G7K3_TUBMM
Uncharacterized protein.
   
 
 0.968
D5G8D7_TUBMM
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.967
D5G8D8_TUBMM
Uncharacterized protein.
 
 0.963
D5GNC1_TUBMM
Uncharacterized protein.
   
 0.958
D5GJN8_TUBMM
Uncharacterized protein; Belongs to the RNA polymerase beta chain family.
 
 
 
 0.954
Your Current Organism:
Tuber melanosporum
NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28
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