STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D5GLX3_TUBMMRING-type domain-containing protein. (540 aa)    
Predicted Functional Partners:
D5G5U0_TUBMM
PRKCSH domain-containing protein.
    
 0.947
D5GE07_TUBMM
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.865
D5G597_TUBMM
UBX domain-containing protein.
    
 
 0.831
D5G6G1_TUBMM
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.821
D5GDB4_TUBMM
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.821
D5GNF4_TUBMM
TGc domain-containing protein.
   
 0.709
D5GEJ1_TUBMM
Uncharacterized protein.
    
 0.696
D5G663_TUBMM
AAA domain-containing protein.
    
 0.627
D5GC80_TUBMM
AAA domain-containing protein.
    
 0.627
D5GEX5_TUBMM
AAA domain-containing protein.
    
 0.627
Your Current Organism:
Tuber melanosporum
NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.