Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJP57330.1 | AJP59639.1 | UC34_10555 | UC34_11240 | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
AJP57330.1 | AJP59653.2 | UC34_10555 | UC34_11760 | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. | 0.429 |
AJP57330.1 | APD11112.1 | UC34_10555 | UC34_25125 | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.475 |
AJP57330.1 | APD11162.1 | UC34_10555 | UC34_05530 | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.629 |
AJP57330.1 | APD11314.1 | UC34_10555 | UC34_14790 | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.581 |
AJP59639.1 | AJP57330.1 | UC34_11240 | UC34_10555 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
AJP59639.1 | AJP59653.2 | UC34_11240 | UC34_11760 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. | 0.663 |
AJP59653.2 | AJP57330.1 | UC34_11760 | UC34_10555 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
AJP59653.2 | AJP59639.1 | UC34_11760 | UC34_11240 | Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.663 |
APD11112.1 | AJP57330.1 | UC34_25125 | UC34_10555 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
APD11162.1 | AJP57330.1 | UC34_05530 | UC34_10555 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.629 |
APD11162.1 | APD11314.1 | UC34_05530 | UC34_14790 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.430 |
APD11314.1 | AJP57330.1 | UC34_14790 | UC34_10555 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.581 |
APD11314.1 | APD11162.1 | UC34_14790 | UC34_05530 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.430 |