STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP57620.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
AJP59683.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.993
AJP59685.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.987
AJP57619.1
6-hydroxynicotinate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.970
AJP58186.1
Xanthine dehydrogenase molybdopterin binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.961
AJP56430.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
APD11414.1
Acylaldehyde oxidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.924
AJP57755.1
Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.903
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
  0.901
APD11413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.806
AJP58341.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.804
Your Current Organism:
Pandoraea vervacti
NCBI taxonomy Id: 656178
Other names: CCM 7667, DSM 23571, NBRC 106088, P. vervacti, Pandoraea sp. NS15, Pandoraea vervacti Sahin et al. 2011, strain NS15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.