Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJP57709.1 | AJP59725.1 | UC34_13410 | UC34_13405 | NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.445 |
AJP57709.1 | astB | UC34_13410 | UC34_13415 | NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.606 |
AJP57709.1 | astD | UC34_13410 | UC34_13420 | NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.462 |
AJP59725.1 | AJP57709.1 | UC34_13405 | UC34_13410 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.445 |
astB | AJP57709.1 | UC34_13415 | UC34_13410 | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.606 |
astB | astD | UC34_13415 | UC34_13420 | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.921 |
astD | AJP57709.1 | UC34_13420 | UC34_13410 | Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
astD | astB | UC34_13420 | UC34_13415 | Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.921 |