STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP58394.1Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (908 aa)    
Predicted Functional Partners:
AJP58395.1
Nitrite reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.997
APD11509.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
AJP58017.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.979
AJP59722.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.928
AJP56105.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AJP56856.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AJP59651.2
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AJP59652.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AJP57733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.845
AJP59904.2
Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.834
Your Current Organism:
Pandoraea vervacti
NCBI taxonomy Id: 656178
Other names: CCM 7667, DSM 23571, NBRC 106088, P. vervacti, Pandoraea sp. NS15, Pandoraea vervacti Sahin et al. 2011, strain NS15
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