STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM31460.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)    
Predicted Functional Partners:
AKM33001.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.906
AKM31461.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.777
AKM31458.1
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.773
AKM30768.1
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.662
AKM31459.1
Translation initiation inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.613
AKM29811.1
Naphthalene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.561
AOX47794.1
Phthalate 4,5-dioxygenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.535
AKM31464.1
Phthalate 4,5-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.519
AKM31716.3
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.506
AKM32587.1
Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.491
Your Current Organism:
Pandoraea faecigallinarum
NCBI taxonomy Id: 656179
Other names: CCM 2766, DSM 23572, NBRC 106092, P. faecigallinarum, Pandoraea faecigallinarum Sahin et al. 2011, Pandoraea sp. KOx, strain KOx
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.