STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO65304.1Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)    
Predicted Functional Partners:
ALO68233.1
Histamine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.634
ALO65302.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.555
ALO65172.1
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.542
glgE
Alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
  0.542
ALO68298.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.542
ALO66049.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.542
ALO68656.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.542
ALO68213.1
Alpha-glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.542
ALO68691.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.542
ALO65303.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
 
   0.539
Your Current Organism:
Arthrobacter alpinus
NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3
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