STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO65395.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)    
Predicted Functional Partners:
ALO66320.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.786
ALO66321.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
ALO65394.1
Phosphonoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.627
ALO66305.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.577
ALO66304.1
UDP-galactopyranose mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.576
ALO65396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.497
ALO66314.1
Glycosyltransferase WbuB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.486
ALO68633.1
dTDP-4-dehydrorhamnose reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.479
ALO68401.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.472
ALO66403.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.445
Your Current Organism:
Arthrobacter alpinus
NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.