Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO65954.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0336 family. (149 aa)    
Predicted Functional Partners:
ALO65955.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.884
ALO65956.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
ALO65953.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.654
ALO66572.1
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.624
ALO68438.1
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.587
ALO67365.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.516
tatA
Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
     0.505
ALO66983.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
ALO68262.1
4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.493
Your Current Organism:
Arthrobacter alpinus
NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3
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