ALO66122.1 protein (Arthrobacter alpinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ALO66122.1

ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)

Predicted Functional Partners:

ALO66121.1

0.976

ALO66123.1

0.888

ALO67595.1

0.706

ALO67319.1

0.594

ALO66124.1

0.567

ALO68307.1

0.562

ALO66678.1

0.562

ALO66679.1

0.529

ALO68093.1

0.482

ALO67975.1

0.473

Your Current Organism:

Arthrobacter alpinus

NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALO66121.1	ALO66122.1	AS189_05960	AS189_05965	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
ALO66121.1	ALO66123.1	AS189_05960	AS189_05970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
ALO66121.1	ALO66124.1	AS189_05960	AS189_05975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
ALO66121.1	ALO67595.1	AS189_05960	AS189_15240	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.720
ALO66122.1	ALO66121.1	AS189_05965	AS189_05960	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
ALO66122.1	ALO66123.1	AS189_05965	AS189_05970	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
ALO66122.1	ALO66124.1	AS189_05965	AS189_05975	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
ALO66122.1	ALO66678.1	AS189_05965	AS189_09455	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyphenol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562
ALO66122.1	ALO66679.1	AS189_05965	AS189_09460	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
ALO66122.1	ALO67319.1	AS189_05965	AS189_13445	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
ALO66122.1	ALO67595.1	AS189_05965	AS189_15240	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
ALO66122.1	ALO67975.1	AS189_05965	AS189_17640	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.473
ALO66122.1	ALO68093.1	AS189_05965	AS189_18345	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
ALO66122.1	ALO68307.1	AS189_05965	AS189_03835	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562
ALO66123.1	ALO66121.1	AS189_05970	AS189_05960	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.940
ALO66123.1	ALO66122.1	AS189_05970	AS189_05965	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
ALO66123.1	ALO66124.1	AS189_05970	AS189_05975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
ALO66124.1	ALO66121.1	AS189_05975	AS189_05960	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
ALO66124.1	ALO66122.1	AS189_05975	AS189_05965	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
ALO66124.1	ALO66123.1	AS189_05975	AS189_05970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551

page 1 of 2

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Textmining

Cooccurrence

Databases

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About