STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO66300.1Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1623 aa)    
Predicted Functional Partners:
ALO68575.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.999
ALO66301.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
ALO66298.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.729
ALO66299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.729
ALO68551.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.615
ALO68262.1
4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.540
ALO66747.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.540
ALO66303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.458
ALO67705.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.458
ALO65365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.457
Your Current Organism:
Arthrobacter alpinus
NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.