STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO66438.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)    
Predicted Functional Partners:
ALO65886.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.757
ALO66550.1
Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.741
ALO65605.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.569
ALO65743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
ALO66439.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.503
ALO66440.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.493
ALO68175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
ALO67647.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.467
ALO66443.1
Exonuclease sbcCD subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.453
ALO67352.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.453
Your Current Organism:
Arthrobacter alpinus
NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3
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