Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
ALO67763.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)    
Predicted Functional Partners:
ALO68631.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.942
ALO67767.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.894
ALO67764.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
ALO67745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.762
ALO67765.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
ALO67747.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.656
ALO67766.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.607
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
 
 0.509
ALO66339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.486
ALO68551.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.484
Your Current Organism:
Arthrobacter alpinus
NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3
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