STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO67828.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)    
Predicted Functional Partners:
ALO68638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.798
ALO66564.1
Protein often found in actinomycetes clustered with signal peptidase and/or RNaseHII; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
ALO66932.1
OpcA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.601
ALO66573.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
AS189_07005
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.574
ALO68438.1
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
AS189_06665
Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
ALO65348.1
Fructose-2,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
manB
Phosphoglucosamine mutase; Converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.485
ALO67835.1
Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.473
Your Current Organism:
Arthrobacter alpinus
NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3
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