STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO67980.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (978 aa)    
Predicted Functional Partners:
ALO67981.1
Molecular chaperone HtpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.937
ALO66825.1
histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.799
ALO67002.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.759
ALO66129.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
   
 0.696
ALO67453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.681
ALO67979.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
ALO65583.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.571
ALO67978.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.543
ALO68551.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.462
dnaK
Molecular chaperone GrpE; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.453
Your Current Organism:
Arthrobacter alpinus
NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.