STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO68008.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)    
Predicted Functional Partners:
ALO66298.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.680
ALO66333.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
ALO68009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.623
ALO68025.1
Type VII secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
 
     0.570
ALO68307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
ALO66552.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.496
ALO67123.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
ALO68502.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
ALO68007.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.444
ALO66329.1
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
Your Current Organism:
Arthrobacter alpinus
NCBI taxonomy Id: 656366
Other names: A. alpinus, Arthrobacter alpinus Zhang et al. 2010, Arthrobacter sp. A3, Arthrobacter sp. S6-3, CGMCC 1.8950, DSM 22274, strain S6-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.