STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13552.1Glycosyl transferase group 1; KEGG: bha:BH3663 lipopolysaccharide biosynthesis; manually curated; PFAM: glycosyl transferase group 1. (365 aa)    
Predicted Functional Partners:
ADQ13551.1
Hypothetical protein; KEGG: cpf:CPF_0915 putative polysaccharide polymerase protein.
  
    0.765
ADQ13556.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: dal:Dalk_1699 NAD-dependent epimerase/dehydratase.
 
    0.715
ADQ13554.1
PFAM: glycosyl transferase group 1; KEGG: rmr:Rmar_0824 glycosyl transferase group 1.
 
    
0.594
ADQ13550.1
PFAM: Integrase catalytic region; KEGG: hor:Hore_00290 integrase catalytic region.
  
    0.558
ADQ13553.1
Hypothetical protein; KEGG: mvo:Mvol_1635 metalloendopeptidase, glycoprotease family.
       0.547
ADQ13555.1
TIGRFAM: nucleotide sugar dehydrogenase; KEGG: gym:GYMC10_2033 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.539
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.533
ADQ14046.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: syp:SYNPCC7002_A1819 NAD-dependent epimerase/dehydratase family protein.
 
    0.518
ADQ13558.1
PFAM: sugar transferase; KEGG: nis:NIS_1249 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.515
ADQ13557.1
PFAM: glycosyl transferase group 1; KEGG: bwe:BcerKBAB4_5067 glycosyl transferase group 1.
    
0.508
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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