Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ13572.1Phage recombination protein Bet; KEGG: cjd:JJD26997_0851 putative prophage LambdaCh01, recombination protein Bet; TIGRFAM: phage recombination protein Bet; PFAM: DNA single-strand annealing protein RecT-like. (283 aa)    
Predicted Functional Partners:
ADQ13570.1
KEGG: cth:Cthe_2464 hypothetical protein.
 
     0.898
ADQ13571.1
KEGG: aca:ACP_1222 hypothetical protein.
 
     0.829
ADQ13564.1
PFAM: DNA primase catalytic core domain; KEGG: hoh:Hoch_0630 DNA primase catalytic core domain protein.
 
     0.795
ADQ14205.1
PFAM: outer membrane efflux protein; KEGG: npu:Npun_F6385 outer membrane efflux protein.
  
     0.718
ADQ13574.1
PFAM: DNA repair protein RadC; KEGG: bcz:pE33L466_0244 DNA repair protein.
       0.627
ADQ15683.1
KEGG: apo:Arcpr_0376 Zn-dependent hydrolase of the beta-lactamase fold-like protein.
  
     0.626
ADQ13573.1
KEGG: ppp:PHYPADRAFT_89684 hypothetical protein.
       0.625
ADQ13535.1
PFAM: regulatory protein MarR; KEGG: taf:THA_749 transcriptional regulator.
  
     0.614
ADQ14188.1
KEGG: amt:Amet_1837 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
  
     0.609
ADQ13751.1
UvrD/REP helicase; ATP-dependent DNA helicase.
 
  
 0.580
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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