Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ13599.1MATE efflux family protein; KEGG: hvo:HVO_1832 multi antimicrobial extrusion family drug/sodium antiporter; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE. (453 aa)    
Predicted Functional Partners:
ADQ13600.1
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: afn:Acfer_0428 CMP/dCMP deaminase zinc-binding protein.
       0.745
ADQ13601.1
PFAM: Uncharacterised protein family UPF0066; KEGG: fpl:Ferp_1301 protein of unknown function UPF0066.
  
    0.601
ADQ13602.1
Hypothetical protein; Manually curated; KEGG: dat:HRM2_35820 hypothetical protein.
       0.593
ADQ14284.1
PFAM: Squalene/phytoene synthase; KEGG: hor:Hore_15920 squalene synthase.
  
  
 0.572
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
  
 0.530
ADQ14289.1
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gct:GC56T3_3077 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.451
ADQ13598.1
KEGG: pfh:PFHG_04030 hypothetical protein.
       0.400
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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