STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13636.1Cof-like hydrolase; KEGG: cac:CA_C3035 HAD family phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3. (292 aa)    
Predicted Functional Partners:
ADQ13637.1
PFAM: OmpA/MotB domain protein; KEGG: nwi:Nwi_1814 OmpA/MotB.
       0.538
ADQ13635.1
PFAM: glycoside hydrolase family 1; KEGG: tit:Thit_0299 glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
       0.523
ADQ13633.1
PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: tte:TTE0336 phosphotransferase system cellobiose-specific component IIA.
  
    0.454
ADQ13634.1
PFAM: glycoside hydrolase family 4; KEGG: tte:TTE0337 alpha-galactosidase/6-phospho-beta-glucosidase.
       0.447
ADQ13639.1
TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; KEGG: tmt:Tmath_0524 PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
     
 0.427
ADQ13632.1
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.402
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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