Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ13637.1PFAM: OmpA/MotB domain protein; KEGG: nwi:Nwi_1814 OmpA/MotB. (352 aa)    
Predicted Functional Partners:
ADQ14944.1
Peptidase M23; KEGG: hor:Hore_11020 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
 
 0.728
ADQ13890.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: hor:Hore_17670 outer membrane chaperone Skp (OmpH).
  
 
 0.704
ADQ14275.1
KEGG: tde:TDE2703 hypothetical protein.
 
 
 0.667
ADQ15221.1
PFAM: Curli production assembly/transport component CsgG; KEGG: csa:Csal_1066 curli production assembly/transport component CsgG.
  
 
 
 0.579
ADQ15222.1
PFAM: Curli production assembly/transport component CsgG; KEGG: csa:Csal_1066 curli production assembly/transport component CsgG.
  
 
 
 0.564
ADQ13636.1
Cof-like hydrolase; KEGG: cac:CA_C3035 HAD family phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3.
       0.538
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.538
ADQ15173.1
PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: hor:Hore_00650 2-alkenal reductase; SMART: PDZ/DHR/GLGF domain protein.
    
 
 0.536
ADQ13564.1
PFAM: DNA primase catalytic core domain; KEGG: hoh:Hoch_0630 DNA primase catalytic core domain protein.
  
   0.535
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
    
 
 0.505
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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