STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ13646.1PFAM: Auxin Efflux Carrier; KEGG: tpd:Teth39_0593 auxin efflux carrier. (308 aa)    
Predicted Functional Partners:
ADQ13645.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: vex:VEA_003224 mannose-6-phosphate isomerase.
       0.678
ADQ13668.1
PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: bbe:BBR47_13780 probable NAD-dependent malic enzyme.
  
  
 0.514
ADQ13669.1
PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: bsu:BSU29220 NADP-dependent malic enzyme (conversion of malate into pyruvate).
  
  
 0.514
ADQ14617.1
PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: bbe:BBR47_13780 probable NAD-dependent malic enzyme.
  
  
 0.514
ADQ13644.1
PFAM: Integrase catalytic region; KEGG: tte:TTE2218 transposase.
       0.487
ADQ13647.1
KEGG: tpd:Teth39_0679 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr.
       0.431
Your Current Organism:
Halanaerobium hydrogeniformans
NCBI taxonomy Id: 656519
Other names: H. hydrogeniformans, Halanaerobium sapolanicus, strain SL-HP
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